Publications

2024

Complement inhibition treatment for geographic atrophy (GA): functional and morphological efficacy and relevant biomarkers in clinical practice
Schmidt-Erfurth, U; Riedl, S
2024 OPTHALMOLOGIE


Deep Neural Networks for Automated Outer Plexiform Layer Subsidence Detection on Retinal OCT of Patients With Intermediate AMD
Aresta G, Araujo, T., Reiter G S, Mai J, Riedl S, Grechenig C, Guymer R H, Wu Z, Schmidt-Erfurth U, Bogunovic H
2024 TVST



Morph-SSL: Self-Supervision with Longitudinal Morphing for Forecasting AMD Progression from OCT Volumes
Chakravarty A, Emre T, Leingang O, Riedl S, Mai J, Scholl HPN, Sivaprasad S, Rueckert D, Lotery A, Schmidt-Erfurth U, Bogunovic H.
2024 IEEE Trans Med Imaging
preprint


3DTINC: Time-Equivariant Non-Contrastive Learning for Predicting Disease Progression from Longitudinal OCTs
Emre T, Chakravarty A, Rivail A, Lachinov D, Leingang O, Riedl S, Mai J, Scholl HPN, Sivaprasad S, Rueckert D, Lotery A, Schmidt-Erfurth U, Bogunovic H.
2024 IEEE Trans Med Imaging
preprint


AI-based support for optical coherence tomography in age-related macular degeneration
Mares, V; Nehemy, MB; Bogunovic, H; Frank, S; Reiter, GS; Schmidt-Erfurth, U
2024 International Journal of Retina and Vitreous


Interactive Deep Learning-Based Retinal OCT Layer Segmentation Refinement by Regressing Translation Maps
Aresta G, Araújo T, Fazekas B. Mai J, Schmidt-Erfurth U, Bogunovic H
2024 IEEE Access


Deep Learning-Based Prediction of Individual Geographic Atrophy Progression from a Single Baseline OCT
Mai J, Lachinov D, Reiter GS, Riedl S, Grechenig C, Bogunovic H, Schmidt-Erfurth U.
2024 Ophthalmol Sci.


Analysing early changes of photoreceptor layer thickness following surgery in eyes with epiretinal membranes
Hollaus M, Georgopoulos M, Iby J, Brugger J, Leingang O, Bogunovic H, Schmidt-Erfurth U, Sacu S.
2024 Eye (Lond)


Learning Spatio-Temporal Model of Disease Progression With NeuralODEs From Longitudinal Volumetric Data
Lachinov D, Chakravarty A, Grechenig C, Schmidt-Erfurth U, Bogunovic H.
2024 IEEE Trans Med Imaging
prepint


An automated comparative analysis of the exudative biomarkers in neovascular age-related macular degeneration, The RAP Study: Report 6.
Najeeb BH, Gerendas BS, Deak GG, Leingang O, Bogunovic H, Schmidt-Erfurth U.
2024 Am J Ophthalmol


Anomaly guided segmentation: Introducing semantic context for lesion segmentation in retinal OCT using weak context supervision from anomaly detection
Seeböck P , Orlando JI,  Michl M, Mai J,  Schmidt-Erfurth U,  Bogunović H
2024 Medical Image Analysis


Deep Multimodal Fusion of Data with Heterogeneous Dimensionality via Projective Networks
Morano J, Aresta G, Grechenig C, Schmidt-Erfurth U, Bogunovic H
2024 IEEE Journal of Biomedical and Health Informatics
preprint

2023

Performance of retinal fluid monitoring in OCT imaging by automated deep learning versus human expert grading in neovascular AMD
Pawloff M, Gerendas BS, Deak G, Bogunovic H, Gruber A, Schmidt-Erfurth U
2023 Eye (Lond)


Few-shot out-of-distribution detection for automated screening in retinal OCT images using deep learning
Araújo T, Aresta G, Schmidt-Erfurth U, Bogunovic H
2023 Scientific Reports


Automated Inter-Device 3D OCT Image Registration using Deep Learning and Retinal Layer Segmentation
Rivas-Villar D, Motschi AR, Pircher M, Hitzenberger CK, Schranz M, Roberts PK, Schmidt-Erfurth U, Bogunović H
2023 Biomed Opt Express


Progression Dynamics of Early versus Later Stage Atrophic Lesions in Nonneovascular Age-Related Macular Degeneration Using Quantitative OCT Biomarker Segmentation
Coulibaly LM, Reiter GS, Fuchs P, Vogl WD, Bogunovic H, Schmidt-Erfurth U
2023 American Journal of Ophthalmology


Clinical validation for automated geographic atrophy monitoring on OCT under complement inhibitory treatment
Mai J, Lachinov D, Riedl S, Reiter GS, Vogl WD, Bogunovic H, Schmidt-Erfurth U
2023 Scientific Reports


Point-to-point associations of drusen and hyperreflective foci volumes with retinal sensitivity in non-exudative age-related macular degeneration
Reiter GS, Bogunovic H, Schlanitz F, Vogl WD, Seeböck P, Ramazanova D, Schmidt-Erfurth U
2023 Eye


Exploring Healthy Retinal Aging with Deep Learning
Menten MJ, Holland R, Leingang O, Bogunovic H, Hagag AM, Kaye R, Riedl S, Traber GL, Hassan ON, Pawlowski N, Glocker B, Fritsche LG, Scholl HPN, Sivaprasad S, Schmidt-Erfurth U, Rueckert D, Lotery AJ
2023 Ophthalmology


Deep survival modeling of longitudinal retinal OCT volumes for predicting the onset of atrophy in patients with intermediate AMD
Rivail A, Vogl WD, Riedl S, Grechenig C, Coulibaly LM, Reiter GS, Guymer RH, Wu Z, Schmidt-Erfurth U, Bogunovic H
2023 Biomedical Optics Express


Predicting Topographic Disease Progression and Treatment Response of Pegcetacoplan in Geographic Atrophy Quantified by Deep Learning
Vogl WD, Riedl S, Mai J, Reiter GS, Lachinov D, Bogunović H, Schmidt-Erfurth U
2023 Ophthalmol Retina


Segmentation of Bruch’s Membrane in retinal OCT with AMD using anatomical priors and uncertainty quantification
Fazekas B, Lachinov D, Aresta G, Mai J, Schmidt-Erfurth U, Bogunović H
2023 IEEE Journal of Biomedical and Health Informatics
preprint


2022

Quantitative Assessment of Depolarization by the Retinal Pigment Epithelium in Healthy and Glaucoma Subjects Measured over a Large Field of View
Motschi AR, Schwarzhans F, Desissaire S, Steiner S, Bogunović H, Roberts PK, Vass C, Hitzenberger CK, Pircher M
2022 PLoS ONE


ADAM Challenge: Detecting Age-related Macular Degeneration from Fundus Images
Fang H, Li F, Fu H, Sun X, Cao X, Lin F, Son J, Kim S, Quellec G, Matta S, Shankaranarayana S, Chen Y-T,  Wang C-H, Shah  NA, Lee C-Y, Hsu C-C, Xie H, Lei B, Baid U, Innani S, Dang K, Shi W, Kamble R, Singhal N, Wang C-W, Lo S-C, Orlando JI, Bogunovic H, Zhang X, Xu Y
2022 IEEE Transactions on Medical Imaging


Deep Dirichlet Uncertainty for Unsupervised Out-of-Distribution Detection of Eye Fundus Photographs in Glaucoma Screening
Araújo T, Aresta G, Bogunović H
2022 IEEE International Symposium on Biomedical Imaging (ISBI) Challenges
preprint


Predicting treat-and-extend outcomes and treatment intervals in neovascular age-related
macular degeneration from retinal optical coherence tomography using artificial intelligence

Bogunović H, Mares V, Reiter GS, Schmidt-Erfurth U
2022 Frontiers in Medicine


Validation of an automated fluid algorithm on real-world data of neovascular age-related macular degeneration over five years
Gerendas BS, Sadeghipour A, Michl M, Goldbach F, Mylonas G, Gruber A, Alten T, Leingang O, Sacu S, Bogunović H, Schmidt-Erfurth U
2022 RETINA


Comparison of Fundus Autofluorescence Versus Optical Coherence Tomography–based Evaluation of the Therapeutic Response to Pegcetacoplan in Geographic Atrophy
Mai J, Riedl S, Reiter GS, Lachinov D, Vogl WD, Bogunović H, Schmidt-Erfurth U
2022 Americal Journal of Ophthalmology
preprint


Correlation of vascular and fluid-related parameters in neovascular age-related macular
degeneration using deep learning

Schranz M, Told R, Hacker V, Reiter GS, Reumueller A, Vogl WD,
Bogunović H, Sacu S, Schmidt-Erfurth U, Roberts PK
2022 Acta Ophthalmologica


Personalized treatment supported by automated quantitative fluid analysis in active neovascular age-related macular degeneration (nAMD) – a phase III, prospective, multicentre, randomized study: design and methods
Coulibaly LM, Sacu S, Fuchs P, Bogunović H, Faustmann G, Unter-
rainer C, Reiter GS, Schmidt-Erfurth U
2022 Eye


TINC: Temporally Informed Non-contrastive Learning for Disease Progression Modeling in Retinal OCT Volumes
Emre T, Chakravarty A, Rivail A, Riedl S, Schmidt-Erfurth U, Bogunović H
2022 MICCAI
preprint


SD-LayerNet: Semi-supervised Retinal Layer Segmentation in OCT Using Disentangled Representation with Anatomical Priors
Fazekas B, Aresta G, Lachinov D, Riedl S, Mai J, Schmidt-Erfurth U, Bogunović H
2022 MICCAI
preprint


Quantitative assessment of retinal fluid in neovascular age-related macular degeneration under anti-VEGF therapy
Reiter GS, Schmidt-Erfurth U
2022 Therapeutic Advances in Ophthalmology


Robust Fovea Detection in Retinal OCT Imaging using Deep Learning
Schurer-Waldheim S, Seebock P, Bogunovic H, Gerendas BS, Schmidt-Erfurth U
2022 IEEE Journal of Biomedical and Health Informatics


The effect of pegcetacoplan treatment on photoreceptor maintenance in geographic atrophy monitored by AI-based OCT analysis
Riedl S, Vogl WD, McKeown A, Scheibler L, Bogunović H, Schmidt-Erfurth U
2022 Ophthalmology Retina


Linking Function and Structure with ReSensNet: Predicting Retinal Sensitivity from OCT using Deep Learning
Seeböck P, Vogl WD, Waldstein SM, Orlando JI,  Baratsits M, Alten T, Arikan M, Mylonas G, Bogunovic H, Schmidt-Erfurth U
2022 Ophthalmology Retina


Systematic Correlation of Central Subfield Thickness with Retinal Fluid Volumes Quantified by Deep Learning in the Major Exudative Macular Diseases
Pawloff M, Bogunovic H, Gruber A, Michl M, Riedl S, Schmidt-Erfurth U
2022 RETINA


Impact of Intra- and Subretinal Fluid on Vision Based on Volume Quantification in the HARBOR Trial
Riedl S, Vogl WD, Waldstein SM, Schmidt-Erfurth U, Bogunović H
2022 Ophthalmology Retina


Therapeutic response in the HAWK and HARRIER trials using deep learning in retinal fluid volume and compartment analysis
Schmidt-Erfurth U, Mulyukov Z, Gerendas BS, Reiter GS, Lorand D, Weissgerber G, Bogunović H
2022 Eye


Developing and validating a multivariable prediction model which predicts progression of intermediate to late age-related macular degeneration—the PINNACLE trial protocol
Sutton J, Menten MJ, Riedl S, Bogunović H, Leingang O, Anders P, Hagag AM, Waldstein S, Wilson A, Cree AJ, Traber G, Fritsche LG, Scholl H, Rueckert D, Schmidt-Erfurth U, Sivaprasad S, Prevost T, Lotery A
2022 Eye


AI-based monitoring of retinal fluid in disease activity and under therapy
Schmidt-Erfurth U, Reiter GS, Riedl S, Seeböck P, Vogl WD, Blodi BA, Domalpally A, Fawzi A, Jia Y, Sarraf D, Bogunovic H
2022 Progress in Retinal and Eye Research


Fundus autofluorescence and optical coherence tomography biomarkers associated with the progression of geographic atrophy secondary to age-related macular degeneration
Bui PTA, Reiter GS, Fabianska M, Waldstein SM, Grechenig C, Bogunovic H, Schmidt-Erfurth U
2022 Eye


Automated quantification of macular fluid in retinal diseases and their response to anti-VEGF therapy
Michl M, Fabianska M, Seeböck P, Sadeghipour A, Haj Najeeb B, Bogunovic H, Schmidt-Erfurth U, Gerendas BS
2022 BJO


2021

Projective Skip-Connections for Segmentation Along a Subset of Dimensions in Retinal OCT
Lachinov D, Seeböck P, Mai J, Goldbach F, Schmidt-Erfurth U, Bogunovic H
2021 MICCAI
preprint


Deep Learning-Based Automated Optical Coherence Tomography Segmentation in Clinical Routine: Getting Closer
Gerendas BS, Bogunovic H, Schmidt-Erfurth U
2021 JAMA Ophthalmol


Predicting Progression of Age-Related Macular Degeneration Using Optical Coherence Tomography and Fundus Photograph
Wu Z, H Bogunovic H, Asgari R, Schmidt-Erfurth U, Guymer RH
2021 Ophthalmology Retina
preprint


Analysis of Fluid Volume and its Impact on Visual Acuity in the FLUID Study as Quantified with Deep Learning
Reiter GS, Grechenig C, Vogl WD, Guymer RH, Arnold JJ, Bogunovic H, Schmidt-Erfurth U
2021 RETINA


Topographic Distribution and Progression of Soft Drusen Volume in Age-Related Macular Degeneration Implicate Neurobiology of Fovea
Pollreisz A, Reiter GS, Bogunovic H, Baumann L, Jakob A, Schlanitz FG, Sacu S, Owsley C, Sloan KR, Curcio CA, Schmidt-Erfurth U
2021 Investigative Ophthalmology & Visual Science


Spatio-temporal Alterations In Retinal And Choroidal Layers In the Progression of Age-related Macular Degeneration (AMD) in Optical Coherence Tomography
Vogl WD, Bogunovic H, Waldstein SM, Riedl S, Schmidt-Erfurth U
2021 Scientific Reports


Impact of Residual Subretinal Fluid Volumes on Treatment Outcomes in a SRF-tolerant Treat & Extend Regimen
Grechenig C, Reiter GS, Riedl S, Arnold J, Guymer R, Gerendas BS, Bogunovic H, Schmidt-Erfurth U
2021 RETINA


The impact of structural OCT changes on visual function in retinal vein occlusion
Michl M, Liu X, Kaider A, Sadeghipour S, Gerendas BS, Schmidt-Erfurth U
2021 Acta Ophthalmologica


2020

Unbiased identification of novel subclinical imaging biomarkers using unsupervised deep learning
Waldstein SM, Seeböck P, Donner R, Sadeghipour A, Bogunovic H, Osborne A, Schmidt-Erfurth U
2020 Scientific Reports


Quantification of Fluid Resolution and Visual Acuity Gain in Patients With Diabetic Macular Edema Using Deep Learning
Roberts PK, Vogl W-D, Gerendas BS, Glassman AR, Bogunovic H, Jampol LM, Schmidt-Erfurth U
2020 JAMA Ophthalmology


Subretinal drusenoid deposits and photoreceptor loss detecting global and local progression of geographic atrophy by SD-OCT imaging
Reiter GS, Told R, Schranz M, Baumann L, Mylonas G, Sacu S, Pollreisz A, Schmidt-Erfurth U
2020 IOVS


End-to-end deep learning model for predicting treatment requirements in neovascular AMD from longitudinal retinal OCT imaging
Romo-Bucheli D, Schmidt-Erfurth U, Bogunovic H
2020 IEEE Journal of Biomedical and Health Informatics
preprint


Characterization of drusen and hyperreflective foci as biomarkers for disease progression in age-related macular degeneration using artificial intelligence in optical coherence tomography
Waldstein SM, Vogl WD, Bogunovic H, Sadeghipour A, Riedl S, Schmidt-Erfurth U
2020 JAMA Ophthalmology


Role of deep learning quantified hyperreflective foci for the prediction of geographic atrophy progression
Schmidt-Erfurth U, Bogunovic H, Grechenig C, Bui P, Fabianska M, Waldstein SM, Reiter GS
2020 American Journal of Ophthalmology


Automated Quantification of Photoreceptor Alteration in Macular Disease using Optical Coherence Tomography and Deep Learning
Orlando JI, Gerendas BS, Klimscha S, Grechenig C, Breger Anna, Ehler Martin, Waldstein SM, Bogunovic H, Schmidt-Erfurth U
2020 Scientific Reports


Application of Automated Quantification of Fluid Volumes to Anti-VEGF Therapy of Neovascular Age-Related Macular Degeneration
Schmidt-Erfurth U, Vogl WD, Jampol LM, Bogunovic H
2020 Ophthalmology


Reducing image variability across OCT devices with unsupervised unpaired learning for improved segmentation of retina
Romo-Bucheli D, Seeböck P, Orlando JI, Gerendas BS, Waldstein SM, Schmidt-Erfurth U, Bogunovic H
2020 Biomedical Optics Express


Effect of posterior vitreous detachment on treat-and-extend versus monthly ranibizumab for neovascular age-related macular degeneration
Waldstein SM, Coulibaly L, Riedl S, Sadeghipour A, Gerendas BS, Schmidt-Erfurth UM
2020 Br J Ophthalmology


Investigating a growth prediction model in advanced age-related macular degeneration with solitary geographic atrophy using quantitative autofluorescence
Reiter GS, Told R, Baumann L, Sacu S, Schmidt-Erfurth U, Pollreisz A
2020 RETINA


On orthogonal projections for dimension reduction and applications in augmented target loss functions for learning problems
Breger A, Orlando JI, Harar P, Dörfler M, Klimscha S, Grechenig C, Gerendas BS, Schmidt-Erfurth U, Ehler M
2020 Journal of Mathematical Imaging and Vision


Morphological and functional characteristics at the onset of exudative conversion in age-related macular degeneration
Hu X, Waldstein SM, Klimscha S, Sadeghipour A, Bogunovic H, Gerendas BS, Osborne A, Schmidt-Erfurth U
2020 Retina


2019

Topographic Analysis of Photoreceptor Loss Correlated with Disease Morphology in Neovascular Age-Related Macular Degeneration
Riedl S, Cooney L, Grechenig C, Sadeghipour A, Pablik E, Seaman JW, Waldstein SM, Schmidt-Erfurth U
2019 RETINA
preprint


f-AnoGAN: Fast unsupervised anomaly detection with generative adversarial networks
Schlegl T, Seeböck P, Waldstein SM, Langs G, Schmidt-Erfurth U
2019 Medical Image Analysis


Modeling Disease Progression In Retinal OCTs With Longitudinal Self-Supervised Learning
Rivail A, Schmidt-Erfurth U, Vogl WD, Waldstein Sebastian M, Riedl S, Grechenig C, Wu Z, Bogunovic H
2019 PRIME-MICCAI


An amplified-target loss approach for photoreceptor layer segmentation in pathological OCT scans
Orlando JI, Breger A, Bogunovic H, Riedl S, Gerendas BS, Ehler M, Schmidt-Erfurth U
2019 OMIA-MICCAI


U-Net with Spatial Pyramid Pooling for Drusen Segmentation in Optical Coherence Tomography
Asgari R, Waldstein S, Schlanitz F, Baratsits M, Schmidt-Erfurth U, Bogunovic, H
2019 OMIA-MICCAI


Multiclass segmentation as multitask learning for drusen segmentation in retinal optical coherence tomography
Asgari R, Orlando JI, Waldstein S, Schlanitz F, Baratsits M, Schmidt-Erfurth U, Bogunovic H
2019 MICCAI


Exploiting Epistemic Uncertainty of Anatomy Segmentation for Anomaly Detection in Retinal OCT
Seeböck P, Orlando JI, Schlegl T, Waldstein S, Bogunovic H, Klimscha S, Langs G, Schmidt-Erfurth U
2019 IEEE Transactions on Medical Imaging


Using CycleGANs for effectively reducing image variability across OCT devices and improving retinal fluid segmentation
Seeböck P, Romo-Bucheli D, Waldstein S, Bogunovic H, Orlando JI, Gerendas BS, Langs G, Schmidt-Erfurth U
2019 ISBI


A Bayesian U-net model with epistemic uncertainty feedback for photoreceptor layer segmentation in pathological OCT scans
Orlando JI, Seeböck P, Bogunovic H, Klimscha S, Grechenig C, Waldstein SM, Gerendas BS, Schmidt-Erfurth U
2019 ISBI


RETOUCH -The Retinal OCT Fluid Detection and Segmentation Benchmark and Challenge
Bogunovic H, Venhuizen F, Klimscha S, Apostolopoulos S, Bab-Hadiashar A, Bagci U, Beg MF, Bekalo L, Chen Q, Ciller C, Gopinath K, Gostar AK, Jeon K, Ji Z, Ho Kang S, Koozekanani DD, Lu D, Morley D, Parhi KK, Suk Park H, Rashno A, Sarunic M, Shaikh S, Sivaswamy J, Tennakoon R, Yadav S, De Zanet S, Waldstein SM, Gerendas BS, Klaver C, Sanchez CI, Schmidt-Erfurth U
2019 IEEE Transactions on Medical Imaging


Unsupervised Identification of Disease Marker Candidates in Retinal OCT Imaging Data
Seeböck P, Waldstein S, Klimscha S, Bogunovic H, Schlegl T, Gerendas BS, Donner R, Schmidt-Erfurth U, Langs G
2019 IEEE Transactions on Medical Imaging


Discovery of Biomarker Candidates in Retinal OCT Images using Deep Learning
Doctoral Thesis
Seeböck P
2019, Vienna, Medical University of Vienna


2018

Fully Automated Segmentation of Hyperreflective Foci in Optical Coherence Tomography Images
Schlegl T, Bogunovic H, Klimscha S, Seeböck P, Sadeghipour A, Gerendas BS, Waldstein SM, Langs G, Schmidt-Erfurth U,
2018 Ophthalmology


Artificial intelligence in retina
Schmidt-Erfurth U, Sadeghipour A, Gerendas BS, Waldstein SM, Bogunovic H,
2018 Progress in retinal and eye research.


Prediction of Individual Disease Conversion in Early AMD using Artificial Intelligence
Schmidt-Erfurth U, Waldstein SM, Klimscha S, Sadeghipour A, Hu X, Gerendas BS, Osborne A, Bogunovic H,
2018 Investigative Ophthalmology & Visual Science


Neuroretinal atrophy following resolution of macular oedema in retinal vein occlusion
Podkowinski D, Philip AM, Vogl WD, Gamper J, Bogunovic H, Gerendas BS, Haj Najeeb B, Waldstein SM, Schmidt-Erfurth U
2018 Br J Ophthalmol.
preprint


Fully Automated Detection and Quantification of Macular Fluid in OCT Using Deep Learning
Schlegl T, Waldstein SM, Bogunovic H, Endstrasser F, Sadeghipour A, Philip AM, Podkowinski D, Gerendas BS, Langs G, Schmidt-Erfurth U
2018 Ophthalmology


Predictive imaging biomarkers relevant for functional and anatomical outcomes during ranibizumab therapy of diabetic macular edema
Gerendas BS, Prager S, Deak G, Simader C, Lammer J, Waldstein SM, Guerin T, Kundi M, Schmidt-Erfurth UM
2018 Br J Ophthalmol


2017

Machine learning to analyze the prognostic value of current imaging biomarkers in neovascular age-related macular degeneration
Schmidt-Erfurth U, Bogunovic H, Sadeghipour A, Schlegl T, Langs G, Gerendas BS, Osborne A, Waldstein SM
2017 Ophthalmology Retina


Spatial correspondence between intraretinal fluid, subretinal fluid and pigment epithelial detachment in neovascular age-related macular degeneration
Klimscha S, Waldstein SM, Schlegl T, Bogunovic H, Sadeghipour A, Philip A-M, Podkowinski D, Pablik E, Zhang L, Abramoff MD, Sonka M, Gerendas BS, Schmidt-Erfurth U
2017 Investigative Ophthalmology & Visual Science


Analyzing and Predicting Visual Acuity Outcomes of Anti-VEGF Therapy by a Longitudinal Mixed Effects Model of Imaging and Clinical Data
Vogl WD, Waldstein SM, Gerendas BS, Schlegl T, Langs G, Schmidt-Erfurth U
2017 Investigative Ophthalmology & Visual Science


Machine Learning of the Progression of Intermediate Age-Related Macular Degeneration Based on OCT Imaging
Bogunovic H, Montuoro A, Baratsits M, Karantonis MG, Waldstein SM, Schlanitz F, Schmidt-Erfurth U.
2017 Investigative Ophthalmology & Visual Science


Predicting Macular Edema Recurrence from Spatio-Temporal Signatures in Optical Coherence Tomography Images
Vogl WD, Waldstein SM, Gerendas BS, Schmidt-Erfurth U, Langs G
2017 IEEE Transactions on Medical Imaging
preprint


Joint retinal layer and fluid segmentation in OCT scans of eyes with severe macular edema using unsupervised representation and auto-context
Montuoro A, Waldstein SM, Gerendas BS, Schmidt-Erfurth U, Bogunovic H
2017 Biomedical Optics Express


Prediction of Anti-VEGF Treatment Requirements in Neovascular AMD Using a Machine Learning Approach
Bogunovic H, Waldstein SM, Schlegl T, Langs G, Sadeghipour A, Liu X, Gerendas BS, Osborne A, Schmidt-Erfurth U
2017 Investigative Ophthalmology & Visual Science


Impact of B-Scan Averaging on Spectralis Optical Coherence Tomography Image Quality before and after Cataract Surgery
Podkowinski D, Sharian Varnousfaderani E, Simader C, Bogunovic H, Philip AM, Gerendas BS, Schmidt-Erfurth U, Waldstein SM
2017 J Ophthalmol.


Evaluating the impact of vitreomacular adhesion on antiangiogenic therapy for retinal vein occlusion using fully automated computational image analysis
Waldstein SM, Montuoro A, Podkowinski D, Philip A-M, Gerendas BS, Bogunovic H, Schmidt-Erfurth U
2017 Scientific Reports


Computational image analysis for prognosis determination in DME
Gerendas BS, Bogunovic H, Sadeghipour A, Schlegl T, Langs G, Waldstein SM, Schmidt-Erfurth U
2017 Vision Research


Supervised learning and dimension reduction techniques for quantification of retinal fluid in optical coherence tomography images
Breger A, Ehler M, Bogunovic H, Waldstein SM, Philip A-M, Schmidt-Erfurth U, Gerendas BS
2017 Eye (Lond).


Guidelines for the management of diabetic macular edema by the European Society of Retina Specialists (EURETINA)
Schmidt-Erfurth U, Garcia-Arumi J, Bandello F, Berg K, Chakravarthy U, Gerendas BS, Jonas J, Larsen M, Tadayoni R, Loewenstein A
2017 Ophthalmologica


Unsupervised Anomaly Detection with Generative Adversarial Networks to Guide Marker Discovery
Schlegl T, Seeböck P, Waldstein SM, Schmidt-Erfurth U, Langs G
2017 Information Processing in Medical Imaging
preprint


A view of the current and future role of optical coherence tomography in the management of age-related macular degeneration
Schmidt-Erfurth U, Klimscha S, Waldstein SM, Bogunovic H
2017 Eye


2016

Automated Fovea Detection in Spectral Domain Optical Coherence Tomography Scans of Exudative Macular Disease
Wu J, Waldstein SM, Montuoro A, Gerendas BS, Langs G, Schmidt-Erfurth U
2016 International Journal of Biomedical Imaging


Multivendor Spectral-Domain Optical Coherence Tomography Dataset, Observer Annotation Performance Evaluation, and Standardized Evaluation Framework for Intraretinal Cystoid Fluid Segmentation
Wu J, Philip AM, Podkowinski D, Gerendas BS, Langs G, Simader C, Waldstein SM, Schmidt-Erfurth UM
2016 Journal of Ophthalmology


A novel benchmark model for intelligent annotation of spectral-domain optical coherence tomography scans using the example of cyst annotation
Shahrian Varnousfaderani E, Wu J, Vogl WD, Philip AM, Montuoro A, Leitner R, Simader C, Waldstein SM, Gerendas BS, Schmidt-Erfurth U
2016 Comput Methods Programs Biomed


Correlation of 3-Dimensionally Quantified Intraretinal and Subretinal Fluid With Visual Acuity in Neovascular Age-Related Macular Degeneration
Waldstein SM, Philip AM, Leitner R, Simader C, Langs G, Gerendas BS, Schmidt-Erfurth U
2016 JAMA Ophthalmology


Choroidal Line Scan Measurements in Swept-Source Optical Coherence Tomography as Surrogates for Volumetric Thickness Assessment
Gerendas BS, Hecht A, Kundi M, Waldstein SM,  Deak G, Simader C, Montuoro A, Schmidt-Erfurth U, Funk M
2016 AJO


A paradigm shift in imaging biomarkers in neovascular age-related macular degeneration
Schmidt-Erfurth U, Waldstein SM
2016 Progress in Retinal and Eye Research


Choroidal thickness maps from spectral domain and swept source optical coherence tomography: algorithmic versus ground truth annotation
Philip AM, Gerendas BS, Zhang L, Faatz H, Podkowinski D, Bogunovic H, Abramoff MD, Hagmann M, Leitner R, Simader C, Sonka M, Waldstein SM, Schmidt-Erfurth U
2016 British Journal of Ophthalmology


Predictive Value of Retinal Morphology for Visual Acuity Outcomes of Different Ranibizumab Treatment Regimens for Neovascular AMD
Waldstein SM, Wright J, Warburton J, Margaron P, Simader C, Schmidt-Erfurth U
2016 Ophthalmology


Identifying and Categorizing Anomalies in Retinal Image Analysis
Seeböck P, Waldstein SM, Klimscha S, Gerendas BS, Donner R, Schlegl T, Schmidt-Erfurth U, Langs G
2016 NIPS 2016


2015

Spatio-Temporal Signatures to Predict Retinal Disease Recurrence
Vogl WD, Waldstein SM, Gerendas BS, Simader C, Glodan A, Podkowinski D, Schmidt-Erfurth U, Langs G
2015 IPMI


Predicting Semantic Descriptions from Medical Images with Convolutional Neural Networks
Schlegl T, Waldstein SM, Vogl WD, Schmidt-Erfurth U, Langs G
2015 IPMI


Automated Retinal Fovea Type Distinction in Spectral-domain Optical Coherence Tomography of Retinal Vein Occlusion
Wu J, Waldstein SM, Gerendas BS, Langs G, Simader C, Schmidt-Erfurth U
2015 SPIE


Quantitative comparison of macular segmentation performance using identical retinal regions across multiple spectral-domain optical coherence tomography instruments
Waldstein SM, Gerendas BS, Montuoro A, Simader C, Schmidt-Erfurth U
2015 BJO


Pigment epithelial detachment followed by retinal cystoid degeneration leads to vision loss in treatment of neovascular age-related macular degeneration
Schmidt-Erfurth U, Waldstein SM, Deak GG, Kundi M, Simader C
2015 Ophthalmology


Comparison of penetration depth in choroidal imaging using swept source vs spectral domain optical coherence tomography
Waldstein SM, Faatz H, Szimacsek M, Glodan AM, Podkowinski D, Montuoro A, Simader C, Gerendas BS,  Schmidt-Erfurth U
2015 Eye


Rotation Invariant Eigenvessels and Auto-context for Retinal Vessel Detection
Montuoro A, Simader C, Langs G, Schmidt-Erfurth U
2015 SPIE


2014

Motion Artefact Correction in Retinal Optical Coherence Tomography using Local Symmetry
Montuoro A, Wu J, Waldstein S, Gerendas G, Langs G, Simader C, Schmidt-Erfurth U
2014 MICCAI


Stable Registration of Pathological 3D SD-OCT Scans using Retinal Vessels 
Wu J, Gerendas B, Waldstein S, Langs G, Simader C, Schmidt-Erfurth U
2014 MICCAI


Longitudinal Alignment of Disease Progression in Fibrosing Interstitial Lung Disease
Vogl WD, Prosch H, Mueller-Mang C, Schmidt-Erfurth U, Langs G
2014 MICCAI


Automated Vessel Shadow Segmentation of Fovea-centred Spectral-domain Images from Multiple OCT Devices
Wu J, Waldstein SM, Gerendas BS, Simader C, Schmidt-Erfurth U
2014 SPIE


Three-dimensional automated choroidal volume assessment on standard spectral-domain optical coherence tomography and correlation with the level of diabetic macular edema
Gerendas BS, Waldstein SM, Simader C, Deak G, Hajnajeeb B, Zhang L, Bogunovic H, Abramoff MD, Kundi M, Sonka M, Schmidt-Erfurth U
2014 AJO


Impact of vitreomacular adhesion on ranibizumab mono- and combination therapy for neovascular age-related macular degeneration
Waldstein SM, Ritter M, Simader C, Mayr-Sponer U, Kundi M, Schmidt-Erfurth U
2014 AJO


A systematic correlation of morphology and function using spectral domain optical coherence tomography and microperimetry in patients with geographic atrophy
Sayegh RG, Kiss CG, Simader C, Kroisamer J, Montuoro A, Mittermüller TJ, Azhary M, Bolz M, Kreil DP, Schmidt-Erfurth U
2014 BJO


Morphologic Parameters Relevant for Visual Outcome During Anti-Angiogenic Therapy of Neovascular Age-Related Macular Degeneration
Simader C, Ritter M, Bolz M, Deák GG, Mayr-Sponer U, Golbaz I, Kundi M, Schmidt-Erfurth U
2014 Ophthalmology


Influence of orthostasis and daytime on retinal thickness in uveitis-associated cystoid macular edema
Munk MR, Kiss CG, Ekmekcioglu C, Huf W, Sulzbacher F, Gerendas B, Simader C, Schmidt-Erfurth U
2014 Curr Eye Res


2013

Influence of the vitreomacular interface on outcomes of ranibizumab therapy in neovascular age-related macular degeneration
Mayr-Sponer U, Waldstein SM, Kundi M, Ritter M, Golbaz I, Heiling U, Papp A, Simader C, Schmidt-Erfurth U
2013 Ophthalmology